Details for gene set NCI_LPA RECEPTOR MEDIATED EVENTS[GSEA]

Table: GSEA Results Summary

Dataset	Set_03_absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy.phenotype_absentNotch_versus_normalThy.cls #absentNotch_versus_normalThy_repos
Phenotype	phenotype_absentNotch_versus_normalThy.cls#absentNotch_versus_normalThy_repos
Upregulated in class	normalThy
GeneSet	NCI_LPA RECEPTOR MEDIATED EVENTS
Enrichment Score (ES)	-0.63726556
Normalized Enrichment Score (NES)	-1.502123
Nominal p-value	0.005277045
FDR q-value	0.26968107
FWER p-Value	0.994

Table: GSEA details [plain text format]
	PROBE	DESCRIPTION (from dataset)	RANK IN GENE LIST	RANK METRIC SCORE	RUNNING ES	CORE ENRICHMENT
1	PTK2	1780148	249	1.681	0.0506	No
2	PRKACA	2640731 4050048	715	0.911	0.0603	No
3	PRKCD	770592	1698	0.405	0.0227	No
4	CYLD	6590079	1812	0.370	0.0307	No
5	RAC1	4810687	1942	0.331	0.0364	No
6	NFKB1	5420358	2177	0.270	0.0340	No
7	PLCB3	4670402	2223	0.258	0.0414	No
8	CASP3	6620397	2780	0.157	0.0174	No
9	UBE2D3	3190452	2980	0.131	0.0116	No
10	ARRB2	2060441	3118	0.115	0.0086	No
11	MAPT	360706 1230706	3216	0.106	0.0074	No
12	CHUK	7050736	3349	0.094	0.0039	No
13	GNA15	870037	3414	0.089	0.0038	No
14	GNA12	1230301	3521	0.080	0.0012	No
15	ADCY6	450364 6290670 6940286	3840	0.061	-0.0137	No
16	ADCY7	6290520 7560739	3945	0.056	-0.0171	No
17	ADCY3	2350347 3440242	4516	0.036	-0.0465	No
18	HRAS	1980551	4798	0.029	-0.0606	No
19	TNF	6650603	4887	0.028	-0.0643	No
20	SLC9A3R2	3360088 5130301 6940707	5087	0.024	-0.0741	No
21	BCL3	3990440	5383	0.020	-0.0892	No
22	GNAZ	6130296	5387	0.020	-0.0886	No
23	ADCY8	6760519	5456	0.019	-0.0916	No
24	PLCG1	6020369	5664	0.017	-0.1021	No
25	HBEGF	2030156	6002	0.015	-0.1197	No
26	BCAR1	1340215	6662	0.011	-0.1549	No
27	GNA14	3390017	7049	0.009	-0.1754	No
28	LYN	6040600	7424	0.007	-0.1953	No
29	PIK3R1	4730671	7437	0.007	-0.1956	No
30	GNAI1	4560390	7727	0.006	-0.2110	No
31	AKT1	5290746	7797	0.006	-0.2145	No
32	XPO1	540707	7981	0.005	-0.2242	No
33	PRKCE	5700053	7983	0.005	-0.2240	No
34	CREB1	1500717 2230358 3610600 6550601	8539	0.004	-0.2539	No
35	TRIP6	6520609	8752	0.003	-0.2652	No
36	GNAI3	4670739	9052	0.002	-0.2812	No
37	GNAO1	2510292 6590487	9289	0.001	-0.2939	No
38	PIK3CB	3800600	9320	0.001	-0.2955	No
39	ADCY2	4610100	9447	0.001	-0.3023	No
40	IL6	380133	9755	0.000	-0.3188	No
41	RAN	2260446 4590647	9782	0.000	-0.3202	No
42	PXN	3290048 6400132	10670	-0.002	-0.3680	No
43	ADCY4	2900402 5220309	11119	-0.004	-0.3920	No
44	PRKD1	1410706 5090438	11376	-0.005	-0.4057	No
45	JUN	840170	11404	-0.005	-0.4070	No
46	ADRA1B	2100484	11822	-0.006	-0.4292	No
47	MALT1	4670292	11831	-0.006	-0.4294	No
48	PLD2	2850097	11920	-0.007	-0.4339	No
49	ATM	3610110 4050524	11982	-0.007	-0.4369	No
50	SRC	580132	12478	-0.009	-0.4633	No
51	PIK3CA	6220129	12684	-0.010	-0.4740	No
52	FBXW11	6450632	12795	-0.011	-0.4795	No
53	SYK	6940133	12885	-0.012	-0.4838	No
54	REL	360707	13310	-0.015	-0.5062	No
55	BIRC2	2940435 4730020	13581	-0.017	-0.5201	No
56	GNAQ	430670 4210131 5900736	13759	-0.019	-0.5289	No
57	PRKCA	6400551	13942	-0.022	-0.5379	No
58	ADCY5	1410402	13945	-0.022	-0.5372	No
59	FOS	1850315	14022	-0.023	-0.5404	No
60	EGFR	4920138 6480521	14057	-0.024	-0.5413	No
61	ERC1	1580170 2630717 6110762 6840280	14388	-0.030	-0.5580	No
62	GNA13	4590102	14479	-0.032	-0.5616	No
63	NOD2	2510050	14922	-0.048	-0.5837	No
64	ADCY9	5690168	15191	-0.065	-0.5957	No
65	RIPK2	5050072 6290632	15223	-0.066	-0.5948	No
66	IKBKG	3450092 3840377 6590592	15620	-0.102	-0.6123	No
67	TIAM1	5420288	15730	-0.113	-0.6139	No
68	RPS6KA5	2120563 7040546	15771	-0.117	-0.6115	No
69	GNG2	2230390	16198	-0.171	-0.6280	Yes
70	MMP2	2570603	16231	-0.176	-0.6230	Yes
71	IKBKB	6840072	16263	-0.180	-0.6179	Yes
72	CRK	1230162 4780128	16406	-0.206	-0.6177	Yes
73	MAPK14	5290731	16518	-0.228	-0.6150	Yes
74	TRAF6	4810292 6200132	16620	-0.253	-0.6108	Yes
75	GNB1	2120397	17111	-0.389	-0.6224	Yes
76	GSK3B	5360348	17132	-0.395	-0.6085	Yes
77	RELB	1400048	17205	-0.414	-0.5966	Yes
78	NFKBIA	1570152	17293	-0.450	-0.5841	Yes
79	NFKB2	2320670	17315	-0.460	-0.5677	Yes
80	RELA	3830075	17328	-0.467	-0.5505	Yes
81	GNA11	2760156 6550671 7100068	17352	-0.473	-0.5338	Yes
82	MAP3K14	5890435	17492	-0.536	-0.5209	Yes
83	GAB1	2970156	17503	-0.540	-0.5008	Yes
84	LCK	3360142	17548	-0.561	-0.4818	Yes
85	MMP9	580338	17653	-0.624	-0.4636	Yes
86	BCL10	2360397	17788	-0.705	-0.4440	Yes
87	ARHGEF1	610347 4850603 6420672	18278	-1.288	-0.4213	Yes
88	TNFAIP3	2900142	18358	-1.497	-0.3685	Yes
89	PTK2B	4730411	18382	-1.574	-0.3097	Yes
90	TNFRSF1A	1090390 6520735	18550	-2.617	-0.2190	Yes
91	RHOA	580142 5900131 5340450	18613	-5.837	0.0002	Yes